In this post, we will see how to resolve nf-core/rnaseq not running deseq2 analysis Question: i’m running the nf-core/rnaseq pipeline and it finished ok, but it doesn’t do the deseq2 comparisons or pca plots. I’ve used version 3.5 and 3.10.1 ...
Question: I am really new in python, so I am doing a consultd and I want that the results be save like dataframe instead of be just print in the terminal. Here is my code: And this is the result ...
Question: I’ve been trying to run through this tutorial (https://bedapub.github.io/besca/tutorials/scRNAseq_tutorial.html) for the past day and constantly get an error after running this portion: bc.pl.kp_genes(adata, min_genes=min_genes, ax = ax1) The error is the following: Anyone have any thoughts? I’ve uninstalled and ...